#+begin_src scheme (set! sync-subfolders #t) #+end_src
Line 2 should be indented. Somehow this was messed up.
The init.org uses headlines to organise the content. For example
* Enable sub-folders #+begin_src scheme (set! sync-subfolders #t) #+end_src
Make sure you have the Scheme underneath a headline. If this is still not working attach your complete init.org file and I'll take a look.
My init.org looks like this right now:
* enable sub-folders #+begin_src scheme (set! sync-subfolders #t) #+end_src
The problem remains the same. I reinstall beorg, link the folder to Working Copy and at first everything is found. A moment later some of my files aren't found anymore.
When I open the files tab the first level of subfolders is shown. After tapping on a folder and switching to the sublevel some (not all!) subfolders are shown although I can find them through search and they're shown in the search results.
If you can provide some screenshots or a video, combined with a directory tree listing that would be great. You might be best raising a ticket to post these. Make sure you blank anything out which is personal. Hopefully that will give me some further clues as to what is going wrong here.